AssayIndex
Content & mass

Counter-ion

The anion paired with a peptide's basic residues in the isolated salt. Usually trifluoroacetate or acetate. Mass in the vial that is not peptide.

Related terms

Trifluoroacetic acid (TFA)
Mobile-phase additive at 0.1 %. Gives excellent peptide peak shape and suppresses electrospray ionisation. Also the most common peptide counter-ion.
Salt form
Which counter-ion the compound was isolated as. Trifluoroacetate is 114 Da per site; acetate is 60. At equal purity, acetate vials contain more peptide.
see also Counter-ion

Where this term appears

The glossary exists to make record pages readable without a chemistry degree. Every technical term on a report resolves here.