AssayIndex
Cross-section

5-Amino-1MQ impurity profile

Every named species the index has reported alongside 5-Amino-1MQ, how often, at what level, and what its presence implies about the synthesis or the handling. Reporting threshold is 0.05 % area; anything below it is invisible to this page and is silently added to the main peak.

68 recordsmedian 99.24 %spec 98.0 %
Median total impurities 0.76% n=68
Median largest single 0.36% n=68
Worst single observed 1.40% n=68
Named species observed 4 / 4 n=4
Named speciesΔRT (min)Δ mass (Da)Seen inMedian % areaMax % area
5-nitro-1MQ (unreduced precursor, +30 Da)+0.68+29.97496%0.091.29
8-amino regioisomer+0.22mass-identical93%0.130.67
free iodide (counter-ion, by IC)0.00mass-identical93%0.130.56
1-methylquinolinium (des-amino, −15 Da)-0.32-15.01191%0.171.40

5-nitro-1MQ (unreduced precursor, +30 Da)

Retention offset from the main peak
+0.68 min on RG-2
Mass difference
+29.974 Da
Reported in
65 of 68 records (96 %)
Level when reported
median 0.09 %, max 1.29 %
Resolution requirement
Baseline-resolved on the reference method.

8-amino regioisomer

Retention offset from the main peak
+0.22 min on RG-2
Mass difference
mass-identical — chromatography only
Reported in
63 of 68 records (93 %)
Level when reported
median 0.13 %, max 0.67 %
Resolution requirement
A gradient long enough to separate it. No mass spectrometer will.

free iodide (counter-ion, by IC)

Retention offset from the main peak
0.00 min on RG-2
Mass difference
mass-identical — chromatography only
Reported in
63 of 68 records (93 %)
Level when reported
median 0.13 %, max 0.56 %
Resolution requirement
A gradient long enough to separate it. No mass spectrometer will.

1-methylquinolinium (des-amino, −15 Da)

Retention offset from the main peak
-0.32 min on RG-2
Mass difference
-15.011 Da
Reported in
62 of 68 records (91 %)
Level when reported
median 0.17 %, max 1.40 %
Resolution requirement
Baseline-resolved on the reference method.

Degradation pathways

Degradants are a handling finding rather than a synthesis finding. A lot that shipped clean and arrived oxidised tells you about the courier, not the chemist.

  • photodegradation of the quinolinium core
  • iodide oxidation to iodine on light exposure — visible browning