AssayIndex
Cross-section

Semaglutide impurity profile

Every named species the index has reported alongside Semaglutide, how often, at what level, and what its presence implies about the synthesis or the handling. Reporting threshold is 0.05 % area; anything below it is invisible to this page and is silently added to the main peak.

926 recordsmedian 98.87 %spec 97.0 %
Median total impurities 1.13% n=926
Median largest single 0.62% n=926
Worst single observed 2.23% n=926
Named species observed 8 / 8 n=8
Named speciesΔRT (min)Δ mass (Da)Seen inMedian % areaMax % area
des-AEEA semaglutide (−145 Da)-0.82-145.07480%0.182.23
[D-Aib8]-diastereomer-0.24mass-identical80%0.182.11
C18 diacid mono-ester+1.36+14.01675%0.101.70
deamidated (Asn→Asp, +1 Da)-0.51+0.98472%0.102.18
des-His1 truncate (−137 Da)-1.14-137.05969%0.071.85
Met(O) sulfoxide (+16 Da)-0.68+15.99556%0.071.92
tBu-protected residual (+56 Da)+2.05+56.06347%0.061.29
semaglutide dimer+3.71+4111.05230%0.071.08

des-AEEA semaglutide (−145 Da)

Retention offset from the main peak
-0.82 min on RG-2
Mass difference
-145.074 Da
Reported in
744 of 926 records (80 %)
Level when reported
median 0.18 %, max 2.23 %
Resolution requirement
Baseline-resolved on the reference method.

[D-Aib8]-diastereomer

Retention offset from the main peak
-0.24 min on RG-2
Mass difference
mass-identical — chromatography only
Reported in
738 of 926 records (80 %)
Level when reported
median 0.18 %, max 2.11 %
Resolution requirement
A gradient long enough to separate it. No mass spectrometer will.

C18 diacid mono-ester

Retention offset from the main peak
+1.36 min on RG-2
Mass difference
+14.016 Da
Reported in
696 of 926 records (75 %)
Level when reported
median 0.10 %, max 1.70 %
Resolution requirement
Baseline-resolved on the reference method.

deamidated (Asn→Asp, +1 Da)

Retention offset from the main peak
-0.51 min on RG-2
Mass difference
+0.984 Da
Reported in
670 of 926 records (72 %)
Level when reported
median 0.10 %, max 2.18 %
Resolution requirement
Baseline-resolved on the reference method.

des-His1 truncate (−137 Da)

Retention offset from the main peak
-1.14 min on RG-2
Mass difference
-137.059 Da
Reported in
643 of 926 records (69 %)
Level when reported
median 0.07 %, max 1.85 %
Resolution requirement
Baseline-resolved on the reference method.

Met(O) sulfoxide (+16 Da)

Retention offset from the main peak
-0.68 min on RG-2
Mass difference
+15.995 Da
Reported in
518 of 926 records (56 %)
Level when reported
median 0.07 %, max 1.92 %
Resolution requirement
Baseline-resolved on the reference method.

tBu-protected residual (+56 Da)

Retention offset from the main peak
+2.05 min on RG-2
Mass difference
+56.063 Da
Reported in
436 of 926 records (47 %)
Level when reported
median 0.06 %, max 1.29 %
Resolution requirement
Baseline-resolved on the reference method.

semaglutide dimer

Retention offset from the main peak
+3.71 min on RG-2
Mass difference
+4111.052 Da
Reported in
274 of 926 records (30 %)
Level when reported
median 0.07 %, max 1.08 %
Resolution requirement
Baseline-resolved on the reference method.

Degradation pathways

Degradants are a handling finding rather than a synthesis finding. A lot that shipped clean and arrived oxidised tells you about the courier, not the chemist.

  • side-chain amide hydrolysis at the AEEA-AEEA linker under alkaline stress
  • Asn26 deamidation accelerating above pH 8
  • fibrillation on agitation of reconstituted material held above 25 °C